Hi all,
I have been looking for a documentation for the INFO column in the VCF of the Mills indels in the GATK resource bundle (Mills_and_1000G_gold_standard.indels.b37.sites.vcf.gz), but to no avail. I did a unique list of all the possible entries for the INFO, but I have no idea what they mean. Does anybody know what they mean? Thank you!!
set=Intersect1000GAll
set=Intersect1000GAll-MillsDoubleCenter
set=Intersect1000GAll-MillsDoubleCenter-MillsTracesUnknown
set=Intersect1000GAll-MillsTracesUnknown
set=Intersect1000GMinusBI
set=Intersect1000GMinusDI
set=Intersect1000GMinusDI-MillsDoubleCenter
set=Intersect1000GMinusOX
set=Intersect1000GMinusOX-MillsCenterUnknown-MillsTracesUnknown
set=Intersect1000GMinusOX-MillsDoubleCenter
set=Intersect1000GMinusOX-MillsDoubleCenter-MillsTracesUnknown
set=Intersect1000GMinusOX-MillsTracesUnknown
set=Intersect1000GMinusSI
set=Intersect1000GMinusSI-MillsDoubleCenter
set=Intersect1000GMinusSI-MillsDoubleCenter-MillsTracesUnknown
set=Intersect1000GMinusSI-MillsTracesUnknown
set=MillsAlleleMatch1000G
set=MillsAlleleMatch1000G-MillsDoubleCenter
set=MillsAlleleMatch1000G-MillsDoubleCenter-MillsTracesUnknown
set=MillsAlleleMatch1000G-MillsTracesUnknown
set=MillsCenterUnknown
set=MillsCenterUnknown-Intersect1000GAll-MillsTracesUnknown
set=MillsCenterUnknown-Intersect1000GMinusBI-MillsTracesUnknown
set=MillsCenterUnknown-Intersect1000GMinusDI-MillsTracesUnknown
set=MillsCenterUnknown-Intersect1000GMinusSI
set=MillsCenterUnknown-Intersect1000GMinusSI-MillsTracesUnknown
set=MillsCenterUnknown-MillsAlleleMatch1000G
set=MillsCenterUnknown-MillsAlleleMatch1000G-MillsTracesUnknown
set=MillsCenterUnknown-MillsTraces3Plus
set=MillsCenterUnknown-MillsTraces3Plus-Intersect1000GMinusSI
set=MillsCenterUnknown-MillsTraces3Plus-MillsAlleleMatch1000G
set=MillsCenterUnknown-MillsTracesUnknown
set=MillsDoubleCenter
set=MillsDoubleCenter-MillsTracesUnknown
set=MillsTraces3Plus
set=MillsTraces3Plus-Intersect1000GMinusSI
set=MillsTraces3Plus-MillsAlleleMatch1000G
set=MillsTracesUnknown
